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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_002165
Query referenceOH1004
LocationChr01:43013505-43014022 (+)
DescriptionSimilar to EPFL3: EPIDERMAL PATTERNING FACTOR-like protein 3 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_002165 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g13898 Controls stomatal patterning. No verified direct reference in this release
At5g10310 Controls stomatal patterning. No verified direct reference in this release
At3g22820 Controls stomatal patterning.
Generation of signaling specificity in Arabidopsis by spatially restricted buffering of ligand-receptor interactions.2011 · DOI: 10.1105/tpc.111.086637
EPIDERMAL PATTERNING FACTOR LIKE5 peptide represses stomatal development by inhibiting meristemoid maintenance in Arabidopsis thaliana.2013 · DOI: 10.1271/bbb.130145
At2g30370 Acts primarily as positive regulator of inflorescence growth.
Regional specification of stomatal production by the putative ligand CHALLAH.2010 · DOI: 10.1242/dev.040931
Generation of signaling specificity in Arabidopsis by spatially restricted buffering of ligand-receptor interactions.2011 · DOI: 10.1105/tpc.111.086637
Regulation of inflorescence architecture by intertissue layer ligand-receptor communication between endodermis and phloem.2012 · DOI: 10.1073/pnas.1117537109
Regulation of plant vascular stem cells by endodermis-derived EPFL-family peptide hormones and phloem-expressed ERECTA-family receptor kinases.2013 · DOI: 10.1093/jxb/ert196
At4g37810 Controls stomatal patterning. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0007267cell-cell signalingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.94; coverage=69.748; evalue=1.04e-08; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009742brassinosteroid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.179; coverage=65.546; evalue=1.04e-10; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010052guard cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.184; coverage=41.176; evalue=3.76e-15; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010374stomatal complex developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.184; coverage=41.176; evalue=3.76e-15; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048481plant ovule developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.179; coverage=65.546; evalue=1.04e-10; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080086stamen filament developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.145; coverage=69.748; evalue=3.26e-09; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000122negative regulation of stomatal complex developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.94; coverage=69.748; evalue=1.04e-08; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.184; coverage=41.176; evalue=3.76e-15; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.184; coverage=41.176; evalue=3.76e-15; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.94; coverage=69.748; evalue=1.04e-08; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.145; coverage=69.748; evalue=3.26e-09; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048018receptor ligand activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.94; coverage=69.748; evalue=1.04e-08; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G30370KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.94; coverage=69.748; evalue=1.04e-08UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G13898KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.184; coverage=41.176; evalue=3.76e-15UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G22820KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.145; coverage=69.748; evalue=3.26e-09UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G37810KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.409; coverage=78.151; evalue=3.53e-08UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G10310KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.179; coverage=65.546; evalue=1.04e-10UniProtKB/Swiss-Prot DAT 2026 current_release