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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_000811
Query referenceOH1004
LocationChr01:15048841-15050681 (-)
DescriptionSimilar to CYCC1-2: Cyclin-C1-2 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000811 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g48630 Cyclin-C1-2. No verified direct reference in this release
At5g48640 Cyclin-C1-1. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os09g0504400 Cyclin-C1-1. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.37; coverage=101.195; evalue=1.01e-52; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016567protein ubiquitinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.37; coverage=101.195; evalue=1.01e-52; UniProt GO evidence=IDA:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045023G0 to G1 transitionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.37; coverage=101.195; evalue=1.01e-52; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045746negative regulation of Notch signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.37; coverage=101.195; evalue=1.01e-52; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045944positive regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.888; coverage=99.203; evalue=4.33e-136; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051301cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.888; coverage=99.203; evalue=4.33e-136; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090209negative regulation of triglyceride metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.37; coverage=101.195; evalue=1.01e-52; UniProt GO evidence=IMP:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000151ubiquitin ligase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.37; coverage=101.195; evalue=1.01e-52; UniProt GO evidence=IDA:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000307cyclin-dependent protein kinase holoenzyme complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.37; coverage=101.195; evalue=1.01e-52; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.888; coverage=99.203; evalue=4.33e-136; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016592mediator complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.888; coverage=99.203; evalue=4.33e-136; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990508CKM complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.37; coverage=101.195; evalue=1.01e-52; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016538cyclin-dependent protein serine/threonine kinase regulator activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.888; coverage=99.203; evalue=4.33e-136; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.37; coverage=101.195; evalue=1.01e-52; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G48630KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.888; coverage=99.203; evalue=4.33e-136UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G48640KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.048; coverage=100.398; evalue=5.5e-130UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os09g0504400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.922; coverage=101.992; evalue=3.02e-132UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGxla:734677KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.548; coverage=103.984; evalue=1.05e-51UniProtKB/Swiss-Prot DAT 2026 current_release