Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_000413 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:7800075-7801872 (+) |
| Description | Similar to NSE4A: Non-structural maintenance of chromosomes element 4 homolog A (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_000413 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 17 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g51130 |
Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | No verified direct reference in this release |
At3g20760 |
Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.892; coverage=89.806; evalue=1.55e-120; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.892; coverage=89.806; evalue=1.55e-120; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.867; coverage=80.34; evalue=1.51e-09; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016925 | protein sumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.0; coverage=66.019; evalue=6.37e-08; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032204 | regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140588 | chromatin looping | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000791 | euchromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.892; coverage=89.806; evalue=1.55e-120; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.892; coverage=89.806; evalue=1.55e-120; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.867; coverage=80.34; evalue=1.51e-09; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005721 | pericentric heterochromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030915 | Smc5-Smc6 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.892; coverage=89.806; evalue=1.55e-120; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033553 | rDNA heterochromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061638 | CENP-A containing chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099115 | chromosome, subtelomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G51130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.892; coverage=89.806; evalue=1.55e-120 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G20760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.684; coverage=89.078; evalue=1.12e-99 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:527312 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.867; coverage=80.34; evalue=1.51e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:54780 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.0; coverage=66.019; evalue=6.37e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:3361330 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.698; coverage=77.184; evalue=3.61e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |