Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_000286 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:5286289-5289244 (+) |
| Description | Similar to BTF3: Basic transcription factor 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_000286 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 24 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g17880 |
Basic transcription factor 3. | No verified direct reference in this release |
At1g73230 |
Nascent polypeptide-associated complex subunit beta. | No verified direct reference in this release |
At5g17920 |
Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation. | No verified direct reference in this release |
At3g03780 |
Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os12g0624000 |
Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006346 | DNA methylation-dependent constitutive heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.66; coverage=47.222; evalue=3.8e-83; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009086 | methionine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010043 | response to zinc ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032259 | methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071266 | 'de novo' L-methionine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.66; coverage=47.222; evalue=3.8e-83; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=79.114; coverage=48.765; evalue=1.84e-76; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.66; coverage=47.222; evalue=3.8e-83; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005854 | nascent polypeptide-associated complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.66; coverage=47.222; evalue=3.8e-83; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.776; coverage=30.247; evalue=1.21e-55; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.66; coverage=47.222; evalue=3.8e-83; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005507 | copper ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008705 | methionine synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G17880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.66; coverage=47.222; evalue=3.8e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G73230 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=79.114; coverage=48.765; evalue=1.84e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G03780 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.776; coverage=30.247; evalue=1.21e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G17920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.755; coverage=30.247; evalue=8.01e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os12g0624000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=87.755; coverage=30.247; evalue=2.12e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release |