Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_000259 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:4833451-4835644 (-) |
| Description | Similar to CYP98A2: Cytochrome P450 98A2 (Glycine max OX%3D3847) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_000259 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 21 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g40890 |
Cytochrome P450 which catalyzes 3'-hydroxylation of p- coumaric esters of shikimic/quinic acids to form lignin monomers. |
CYP98A3 from Arabidopsis thaliana is a 3'-hydroxylase of phenolic esters, a missing link in the phenylpropanoid pathway.2001 · DOI: 10.1074/jbc.m104047200 The Arabidopsis REF8 gene encodes the 3-hydroxylase of phenylpropanoid metabolism.2002 · DOI: 10.1046/j.1365-313x.2002.01266.x Changes in secondary metabolism and deposition of an unusual lignin in the ref8 mutant of Arabidopsis.2002 · DOI: 10.1046/j.1365-313x.2002.01267.x
|
At1g74550 |
Acts redundantly with CYP98A8 as tricoumaroylspermidine meta-hydroxylase. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0008216 | spermidine metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.207; coverage=97.476; evalue=8.4e-170; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009699 | phenylpropanoid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009805 | coumarin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009809 | lignin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009813 | flavonoid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009820 | alkaloid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.888; coverage=96.699; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.207; coverage=97.476; evalue=8.4e-170; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.816; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004497 | monooxygenase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005506 | iron ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.816; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.888; coverage=96.699; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.816; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0020037 | heme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.816; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046409 | p-coumarate 3-hydroxylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072547 | tricoumaroylspermidine meta-hydroxylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.207; coverage=97.476; evalue=8.4e-170; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072548 | dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.207; coverage=97.476; evalue=8.4e-170; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072549 | monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.207; coverage=97.476; evalue=8.4e-170; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G74550 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.207; coverage=97.476; evalue=8.4e-170 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G40890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.717; coverage=94.563; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gmx:606506 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.816; coverage=100.0; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sbi:8077042 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.41; coverage=100.388; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |