Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_000063 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:1421394-1423696 (-) |
| Description | Similar to PHL7: Myb family transcription factor PHL7 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_000063 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 22 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g01060 |
Myb family transcription factor PHL7. | No verified direct reference in this release |
At4g28610 |
Transcription factor involved in phosphate starvation signaling. | |
At5g06800 |
Myb family transcription factor PHL5. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os04g0665600 |
Transcription factor binding to specific DNA sequences of target genes promoters, such as the motif R1BS 5'-NAKATNCN-3' and the motif P1BS 5'-GNATATNC-3' to trigger their expression. | |
UniProt: A2XYN9 |
Transcription factor binding to specific DNA sequences of target genes promoters, such as the motif R1BS 5'-NAKATNCN-3' and the motif P1BS 5'-GNATATNC-3' to trigger their expression (By similarity). | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.126; coverage=68.235; evalue=1.85e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.126; coverage=68.235; evalue=1.85e-49; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007623 | circadian rhythm | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.865; coverage=81.569; evalue=1.98e-42; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009742 | brassinosteroid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010167 | response to nitrate | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.865; coverage=81.569; evalue=1.98e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010966 | regulation of phosphate transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016036 | cellular response to phosphate starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.865; coverage=81.569; evalue=1.98e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016132 | brassinosteroid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034765 | regulation of monoatomic ion transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.865; coverage=81.569; evalue=1.98e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048768 | root hair cell tip growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.126; coverage=68.235; evalue=1.85e-49; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051511 | negative regulation of unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055063 | sulfate ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.865; coverage=81.569; evalue=1.98e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071486 | cellular response to high light intensity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.865; coverage=81.569; evalue=1.98e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903842 | response to arsenite ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.865; coverage=81.569; evalue=1.98e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000024 | regulation of leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.126; coverage=68.235; evalue=1.85e-49; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.126; coverage=68.235; evalue=1.85e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.126; coverage=68.235; evalue=1.85e-49; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G01060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.126; coverage=68.235; evalue=1.85e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G28610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.865; coverage=81.569; evalue=1.98e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G06800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.308; coverage=71.373; evalue=9.34e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0665600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4337318 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.788; coverage=51.765; evalue=9.98e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release |