query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA07G345980	TkA07G345980	function	TkA07G345980	Similar to RAP: RAP domain-containing protein%2C chloroplastic (Arabidopsis thaliana OX%3D3702)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0000963	mitochondrial RNA processing	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0006952	defense response	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0044528	regulation of mitochondrial mRNA stability	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:1901259	chloroplast rRNA processing	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0005634	nucleus	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0005759	mitochondrial matrix	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0009507	chloroplast	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0035770	ribonucleoprotein granule	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0042644	chloroplast nucleoid	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0042646	plastid nucleoid	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	GO	GO:0003723	RNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	KEGG	ath:AT2G31890	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.538; coverage=88.408; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	KEGG	dosa:Os03g0425000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.182; coverage=85.008; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	KEGG	osa:4333151	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.182; coverage=85.008; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_029771	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA07G345980	TkA07G345980	organism_homology	Q8VZE7	sp|Q8VZE7|RAP_ARATH RAP domain-containing protein, chloroplastic	Arabidopsis thaliana	identity=64.7; coverage=92.604; evalue=6.43e-136; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA07G345980; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA07G345980			False
TkA07G345980	TkA07G345980	organism_homology	Q84MH1	sp|Q84MH1|RAP_ORYSJ RAP domain-containing protein, chloroplastic	Oryza sativa subsp. japonica	identity=57.8; coverage=92.604; evalue=2.78e-127; rank=2	TK1151 Swiss-Prot homology; source_gene=TkA07G345980; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA07G345980			False
TkA07G345980	TkA07G345980	reference_gene_function	At2g31890	RNA-binding protein required for chloroplast 16S rRNA maturation, an important process which supports chloroplast gene expression and biogenesis.	Arabidopsis	No verified direct reference in this release							
TkA07G345980	TkA07G345980	reference_gene_function	Os03g0425000	Probable RNA-binding protein that plays an essential role in chloroplast development.	Rice	No verified direct reference in this release