query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA04G322400	TkA04G322400	function	TkA04G322400	Similar to TK1A: Thymidine kinase a (Arabidopsis thaliana OX%3D3702)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0006302	double-strand break repair	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0006950	response to stress	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.756; coverage=33.198; evalue=2.22e-25; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0009409	response to cold	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.631; coverage=41.7; evalue=5.03e-24; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0010225	response to UV-C	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0046104	thymidine metabolic process	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0071897	DNA biosynthetic process	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0090351	seedling development	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.631; coverage=41.7; evalue=5.03e-24; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0005737	cytoplasm	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0009507	chloroplast	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.631; coverage=41.7; evalue=5.03e-24; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0004797	thymidine kinase activity	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0005524	ATP binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0042802	identical protein binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26; UniProt GO evidence=IPI:IntAct	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	GO	GO:0046872	metal ion binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	KEGG	ath:AT3G07800	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=46.154; evalue=2.88e-26	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	KEGG	ath:AT5G23070	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.631; coverage=41.7; evalue=5.03e-24	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	KEGG	vg:1486465	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.554; coverage=33.603; evalue=5.67e-12	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037548	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G322400	TkA04G322400	organism_homology	Q9S750	sp|Q9S750|KITHA_ARATH Thymidine kinase a	Arabidopsis thaliana	identity=47.4; coverage=29.058; evalue=1.85e-23; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA04G322400; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA04G322400			False
TkA04G322400	TkA04G322400	organism_homology	O81263	sp|O81263|KITH_ORYSJ Thymidine kinase	Oryza sativa subsp. japonica	identity=64.8; coverage=18.586; evalue=1.9e-23; rank=2	TK1151 Swiss-Prot homology; source_gene=TkA04G322400; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA04G322400			False
TkA04G322400	TkA04G322400	reference_gene_literature	At3g07800	Part of the salvage pathway for purine and pyrimidine deoxyribonucleotide synthesis.	Arabidopsis	Two thymidine kinases and one multisubstrate deoxyribonucleoside kinase salvage DNA precursors in Arabidopsis thaliana.; PMID=22897443; DOI=10.1111/j.1742-4658.2012.08747.x	https://pubmed.ncbi.nlm.nih.gov/22897443/						
TkA04G322400	TkA04G322400	reference_gene_literature	At3g07800	Part of the salvage pathway for purine and pyrimidine deoxyribonucleotide synthesis.	Arabidopsis	Arabidopsis thaliana thymidine kinase 1a is ubiquitously expressed during development and contributes to confer tolerance to genotoxic stress.; PMID=25537647; DOI=10.1007/s11103-014-0277-7	https://pubmed.ncbi.nlm.nih.gov/25537647/						
TkA04G322400	TkA04G322400	reference_gene_literature	At5g23070	Part of the salvage pathway for purine and pyrimidine deoxyribonucleotide synthesis.	Arabidopsis	Two thymidine kinases and one multisubstrate deoxyribonucleoside kinase salvage DNA precursors in Arabidopsis thaliana.; PMID=22897443; DOI=10.1111/j.1742-4658.2012.08747.x	https://pubmed.ncbi.nlm.nih.gov/22897443/						
TkA04G322400	TkA04G322400	reference_gene_literature	At3g26744	Transcriptional activator that regulates the cold-induced transcription of CBF/DREB1 genes.	Arabidopsis	SIZ1-mediated sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance in Arabidopsis.; PMID=17416732; DOI=10.1105/tpc.106.048397	https://pubmed.ncbi.nlm.nih.gov/17416732/						
TkA04G322400	TkA04G322400	reference_gene_literature	At3g26744	Transcriptional activator that regulates the cold-induced transcription of CBF/DREB1 genes.	Arabidopsis	SCREAM/ICE1 and SCREAM2 specify three cell-state transitional steps leading to arabidopsis stomatal differentiation.; PMID=18641265; DOI=10.1105/tpc.108.060848	https://pubmed.ncbi.nlm.nih.gov/18641265/						
TkA04G322400	TkA04G322400	reference_gene_literature	At1g12860	Mediates stomatal differentiation in the epidermis probably by controlling successive roles of SPCH, MUTE, and FAMA.	Arabidopsis	SCREAM/ICE1 and SCREAM2 specify three cell-state transitional steps leading to arabidopsis stomatal differentiation.; PMID=18641265; DOI=10.1105/tpc.108.060848	https://pubmed.ncbi.nlm.nih.gov/18641265/						
TkA04G322400	TkA04G322400	reference_gene_function	Os03g0113100	Thymidine kinase.	Rice	No verified direct reference in this release