query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation TkA04G127730 TkA04G127730 function TkA04G127730 Similar to NAC031: Protein CUP-SHAPED COTYLEDON 3 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.846; coverage=75.263; evalue=1.01e-97; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0009908 flower development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.452; coverage=44.211; evalue=5.22e-76; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0010014 meristem initiation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.846; coverage=75.263; evalue=1.01e-97; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0010072 primary shoot apical meristem specification biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.452; coverage=44.211; evalue=5.22e-76; UniProt GO evidence=TAS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0010199 organ boundary specification between lateral organs and the meristem biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.846; coverage=75.263; evalue=1.01e-97; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0010223 secondary shoot formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.452; coverage=44.211; evalue=5.22e-76; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0048366 leaf development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.377; coverage=40.526; evalue=5.71e-74; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0048527 lateral root development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.452; coverage=44.211; evalue=5.22e-76; UniProt GO evidence=TAS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0051782 negative regulation of cell division biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.452; coverage=44.211; evalue=5.22e-76; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0090691 formation of plant organ boundary biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.452; coverage=44.211; evalue=5.22e-76; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0090709 regulation of timing of plant organ formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.377; coverage=40.526; evalue=5.71e-74; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:1990641 response to iron ion starvation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.026; coverage=51.316; evalue=1.01e-76; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.846; coverage=75.263; evalue=1.01e-97; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0000976 transcription cis-regulatory region binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.846; coverage=75.263; evalue=1.01e-97; UniProt GO evidence=IPI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 GO GO:0003700 DNA-binding transcription factor activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.846; coverage=75.263; evalue=1.01e-97; UniProt GO evidence=ISS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 KEGG ath:AT1G76420 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.846; coverage=75.263; evalue=1.01e-97 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 KEGG ath:AT3G15170 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.452; coverage=44.211; evalue=5.22e-76 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 KEGG ath:AT5G07680 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=63.687; coverage=47.105; evalue=9.09e-75 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 KEGG ath:AT5G53950 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.377; coverage=40.526; evalue=5.71e-74 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 KEGG ath:AT5G61430 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.026; coverage=51.316; evalue=1.01e-76 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_035480 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA04G127730 TkA04G127730 organism_homology Q9S851 sp|Q9S851|NAC31_ARATH Protein CUP-SHAPED COTYLEDON 3 Arabidopsis thaliana identity=76.3; coverage=83.735; evalue=8.45e-73; rank=1 TK1151 Swiss-Prot homology; source_gene=TkA04G127730; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA04G127730 False TkA04G127730 TkA04G127730 organism_homology_status Oryza sativa 当前查询蛋白的来源表暂无该物种命中；不能据此判断不存在同源。 no_species_hit TK1151 TK1151 TkA04G127730 False TkA04G127730 TkA04G127730 reference_gene_literature At1g76420 Transcription activator. Arabidopsis The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis.; PMID=12837947; DOI=10.1105/tpc.012203 https://pubmed.ncbi.nlm.nih.gov/12837947/ TkA04G127730 TkA04G127730 reference_gene_literature At1g76420 Transcription activator. Arabidopsis Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation.; PMID=17122068; DOI=10.1105/tpc.106.045716 https://pubmed.ncbi.nlm.nih.gov/17122068/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes.; PMID=10079219; DOI=10.1242/dev.126.8.1563 https://pubmed.ncbi.nlm.nih.gov/10079219/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis Involvement of CUP-SHAPED COTYLEDON genes in gynoecium and ovule development in Arabidopsis thaliana.; PMID=10750709; DOI=10.1093/pcp/41.1.60 https://pubmed.ncbi.nlm.nih.gov/10750709/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation.; PMID=11245578; DOI=10.1242/dev.128.7.1127 https://pubmed.ncbi.nlm.nih.gov/11245578/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis Roles of PIN-FORMED1 and MONOPTEROS in pattern formation of the apical region of the Arabidopsis embryo.; PMID=12163400; DOI=10.1242/dev.129.17.3965 https://pubmed.ncbi.nlm.nih.gov/12163400/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis Developmental events and shoot apical meristem gene expression patterns during shoot development in Arabidopsis thaliana.; PMID=12492830; DOI=10.1046/j.1365-313x.2002.01479.x https://pubmed.ncbi.nlm.nih.gov/12492830/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis The CUP-SHAPED COTYLEDON genes promote adventitious shoot formation on calli.; PMID=12610213; DOI=10.1093/pcp/pcg038 https://pubmed.ncbi.nlm.nih.gov/12610213/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis.; PMID=12787253; DOI=10.1046/j.1365-313x.2003.01759.x https://pubmed.ncbi.nlm.nih.gov/12787253/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis CUC1 gene activates the expression of SAM-related genes to induce adventitious shoot formation.; PMID=14617069; DOI=10.1046/j.1365-313x.2003.01911.x https://pubmed.ncbi.nlm.nih.gov/14617069/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs.; PMID=15202996; DOI=10.1016/j.cub.2004.06.022 https://pubmed.ncbi.nlm.nih.gov/15202996/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems.; PMID=15294871; DOI=10.1242/dev.01320 https://pubmed.ncbi.nlm.nih.gov/15294871/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis.; PMID=15723790; DOI=10.1016/j.cub.2005.02.017 https://pubmed.ncbi.nlm.nih.gov/15723790/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis KNAT6: an Arabidopsis homeobox gene involved in meristem activity and organ separation.; PMID=16798887; DOI=10.1105/tpc.106.041988 https://pubmed.ncbi.nlm.nih.gov/16798887/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation.; PMID=17122068; DOI=10.1105/tpc.106.045716 https://pubmed.ncbi.nlm.nih.gov/17122068/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness.; PMID=17287247; DOI=10.1242/dev.02817 https://pubmed.ncbi.nlm.nih.gov/17287247/ TkA04G127730 TkA04G127730 reference_gene_literature At3g15170 Transcription activator of STM and KNAT6. Arabidopsis Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant.; PMID=9212461; DOI=10.1105/tpc.9.6.841 https://pubmed.ncbi.nlm.nih.gov/9212461/ TkA04G127730 TkA04G127730 reference_gene_function At5g61430 Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. Arabidopsis No verified direct reference in this release TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes.; PMID=10079219; DOI=10.1242/dev.126.8.1563 https://pubmed.ncbi.nlm.nih.gov/10079219/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis Involvement of CUP-SHAPED COTYLEDON genes in gynoecium and ovule development in Arabidopsis thaliana.; PMID=10750709; DOI=10.1093/pcp/41.1.60 https://pubmed.ncbi.nlm.nih.gov/10750709/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis Roles of PIN-FORMED1 and MONOPTEROS in pattern formation of the apical region of the Arabidopsis embryo.; PMID=12163400; DOI=10.1242/dev.129.17.3965 https://pubmed.ncbi.nlm.nih.gov/12163400/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis The CUP-SHAPED COTYLEDON genes promote adventitious shoot formation on calli.; PMID=12610213; DOI=10.1093/pcp/pcg038 https://pubmed.ncbi.nlm.nih.gov/12610213/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs.; PMID=15202996; DOI=10.1016/j.cub.2004.06.022 https://pubmed.ncbi.nlm.nih.gov/15202996/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems.; PMID=15294871; DOI=10.1242/dev.01320 https://pubmed.ncbi.nlm.nih.gov/15294871/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis.; PMID=15723790; DOI=10.1016/j.cub.2005.02.017 https://pubmed.ncbi.nlm.nih.gov/15723790/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis KNAT6: an Arabidopsis homeobox gene involved in meristem activity and organ separation.; PMID=16798887; DOI=10.1105/tpc.106.041988 https://pubmed.ncbi.nlm.nih.gov/16798887/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis.; PMID=17098808; DOI=10.1105/tpc.106.045617 https://pubmed.ncbi.nlm.nih.gov/17098808/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation.; PMID=17122068; DOI=10.1105/tpc.106.045716 https://pubmed.ncbi.nlm.nih.gov/17122068/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis Plants expressing a miR164-resistant CUC2 gene reveal the importance of post-meristematic maintenance of phyllotaxy in Arabidopsis.; PMID=17251269; DOI=10.1242/dev.02774 https://pubmed.ncbi.nlm.nih.gov/17251269/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness.; PMID=17287247; DOI=10.1242/dev.02817 https://pubmed.ncbi.nlm.nih.gov/17287247/ TkA04G127730 TkA04G127730 reference_gene_literature At5g53950 Transcription activator of STM and KNAT6. Arabidopsis Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant.; PMID=9212461; DOI=10.1105/tpc.9.6.841 https://pubmed.ncbi.nlm.nih.gov/9212461/ TkA04G127730 TkA04G127730 reference_gene_literature At5g39610 Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[ACG][CA]GT[AG](5-6n)[CT]AC[AG]-3'. Arabidopsis The delayed leaf senescence mutants of Arabidopsis, ore1, ore3, and ore9 are tolerant to oxidative stress.; PMID=15295076; DOI=10.1093/pcp/pch110 https://pubmed.ncbi.nlm.nih.gov/15295076/ TkA04G127730 TkA04G127730 reference_gene_literature At5g39610 Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[ACG][CA]GT[AG](5-6n)[CT]AC[AG]-3'. Arabidopsis Trifurcate feed-forward regulation of age-dependent cell death involving miR164 in Arabidopsis.; PMID=19229035; DOI=10.1126/science.1166386 https://pubmed.ncbi.nlm.nih.gov/19229035/ TkA04G127730 TkA04G127730 reference_gene_literature At5g39610 Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[ACG][CA]GT[AG](5-6n)[CT]AC[AG]-3'. Arabidopsis Forward and reverse genetics to identify genes involved in the age-related resistance response in Arabidopsis thaliana.; PMID=19694953; DOI=10.1111/j.1364-3703.2009.00557.x https://pubmed.ncbi.nlm.nih.gov/19694953/ TkA04G127730 TkA04G127730 reference_gene_literature At5g39610 Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[ACG][CA]GT[AG](5-6n)[CT]AC[AG]-3'. Arabidopsis A gene regulatory network controlled by the NAC transcription factor ANAC092/AtNAC2/ORE1 during salt-promoted senescence.; PMID=20113437; DOI=10.1111/j.1365-313x.2010.04151.x https://pubmed.ncbi.nlm.nih.gov/20113437/ TkA04G127730 TkA04G127730 reference_gene_literature At5g39610 Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[ACG][CA]GT[AG](5-6n)[CT]AC[AG]-3'. Arabidopsis ORS1, an H₂O₂-responsive NAC transcription factor, controls senescence in Arabidopsis thaliana.; PMID=21303842; DOI=10.1093/mp/ssq080 https://pubmed.ncbi.nlm.nih.gov/21303842/ TkA04G127730 TkA04G127730 reference_gene_literature At5g39610 Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[ACG][CA]GT[AG](5-6n)[CT]AC[AG]-3'. Arabidopsis NAC transcription factor ORE1 and senescence-induced BIFUNCTIONAL NUCLEASE1 (BFN1) constitute a regulatory cascade in Arabidopsis.; PMID=23340744; DOI=10.1093/mp/sst012 https://pubmed.ncbi.nlm.nih.gov/23340744/ TkA04G127730 TkA04G127730 reference_gene_literature At5g39610 Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[ACG][CA]GT[AG](5-6n)[CT]AC[AG]-3'. Arabidopsis ORE1 balances leaf senescence against maintenance by antagonizing G2-like-mediated transcription.; PMID=23459204; DOI=10.1038/embor.2013.24 https://pubmed.ncbi.nlm.nih.gov/23459204/