query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA04G098140	TkA04G098140	function	TkA04G098140	Similar to Os01g0963400: Thioredoxin Y%2C chloroplastic (Oryza sativa subsp. japonica OX%3D39947)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0009416	response to light stimulus	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.112; coverage=91.477; evalue=9.22e-60; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0043085	positive regulation of catalytic activity	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.636; coverage=81.25; evalue=2.33e-61; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0045454	cell redox homeostasis	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.667; coverage=51.136; evalue=3.54e-34; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0005634	nucleus	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.112; coverage=91.477; evalue=9.22e-60; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0005737	cytoplasm	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.748; coverage=78.977; evalue=1.28e-61; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0005829	cytosol	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.667; coverage=51.136; evalue=3.54e-34; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0009507	chloroplast	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.748; coverage=78.977; evalue=1.28e-61; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0009570	chloroplast stroma	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.636; coverage=81.25; evalue=2.33e-61; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0008047	enzyme activator activity	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.636; coverage=81.25; evalue=2.33e-61; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	GO	GO:0015035	protein-disulfide reductase activity	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.748; coverage=78.977; evalue=1.28e-61; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	KEGG	ath:AT1G43560	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.112; coverage=91.477; evalue=9.22e-60	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	KEGG	ath:AT1G50320	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.5; coverage=90.909; evalue=2.81e-24	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	KEGG	ath:AT1G76760	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.636; coverage=81.25; evalue=2.33e-61	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	KEGG	dosa:Os01g0963400	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.748; coverage=78.977; evalue=1.28e-61	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	KEGG	osa:4324458	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.748; coverage=78.977; evalue=1.28e-61	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	KEGG	syn:slr0233	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.667; coverage=51.136; evalue=3.54e-34	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035897	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G098140	TkA04G098140	organism_homology	Q6NPF9	sp|Q6NPF9|TRXY1_ARATH Thioredoxin Y1, chloroplastic	Arabidopsis thaliana	identity=77.8; coverage=75.524; evalue=1.07e-56; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA04G098140; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA04G098140			False
TkA04G098140	TkA04G098140	organism_homology	Q5JMR9	sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic	Oryza sativa subsp. japonica	identity=78.5; coverage=74.825; evalue=5.41e-56; rank=2	TK1151 Swiss-Prot homology; source_gene=TkA04G098140; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA04G098140			False
TkA04G098140	TkA04G098140	reference_gene_function	At1g76760	Thiol-disulfide oxidoreductase that poorly activates chloroplastic malate dehydrogenase (NADP-MDH) and fructose-1,6-bisphosphatase.	Arabidopsis	No verified direct reference in this release							
TkA04G098140	TkA04G098140	reference_gene_function	At1g43560	Thiol-disulfide oxidoreductase that poorly activates chloroplastic malate dehydrogenase (NADP-MDH) and fructose-1,6-bisphosphatase.	Arabidopsis	No verified direct reference in this release							
TkA04G098140	TkA04G098140	reference_gene_function	Os01g0963400	Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.	Rice	No verified direct reference in this release