query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA04G019820	TkA04G019820	function	TkA04G019820	Similar to LSH6: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (Arabidopsis thaliana OX%3D3702)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0009299	mRNA transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.37; coverage=82.653; evalue=1.26e-80; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0009416	response to light stimulus	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.37; coverage=82.653; evalue=1.26e-80; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0010199	organ boundary specification between lateral organs and the meristem	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.692; coverage=99.49; evalue=7.31e-78; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0010492	maintenance of shoot apical meristem identity	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.692; coverage=99.49; evalue=7.31e-78; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0045892	negative regulation of DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=88.06; coverage=68.367; evalue=1.02e-77; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0048441	petal development	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.692; coverage=99.49; evalue=7.31e-78; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0048834	specification of petal number	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.692; coverage=99.49; evalue=7.31e-78; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0080050	regulation of seed development	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=88.06; coverage=68.367; evalue=1.02e-77; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0090698	post-embryonic plant morphogenesis	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.37; coverage=82.653; evalue=1.26e-80; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0005634	nucleus	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.37; coverage=82.653; evalue=1.26e-80; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0003677	DNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.37; coverage=82.653; evalue=1.26e-80; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	GO	GO:0042803	protein homodimerization activity	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=88.06; coverage=68.367; evalue=1.02e-77; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	KEGG	ath:AT1G07090	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.37; coverage=82.653; evalue=1.26e-80	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	KEGG	ath:AT2G31160	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.692; coverage=99.49; evalue=7.31e-78	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	KEGG	ath:AT5G58500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=77.778; coverage=68.878; evalue=6.79e-76	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	KEGG	dosa:Os02g0811000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=88.06; coverage=68.367; evalue=1.02e-77	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_036869	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G019820	TkA04G019820	organism_homology	O82268	sp|O82268|LSH3_ARATH Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3	Arabidopsis thaliana	identity=70.0; coverage=67.059; evalue=2.09e-54; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA04G019820; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA04G019820			False
TkA04G019820	TkA04G019820	organism_homology	A2XAV5	sp|A2XAV5|G1L6_ORYSI Protein G1-like6	Oryza sativa subsp. indica	identity=70.1; coverage=59.412; evalue=3.65e-51; rank=5	TK1151 Swiss-Prot homology; source_gene=TkA04G019820; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA04G019820			False
TkA04G019820	TkA04G019820	reference_gene_literature	At2g31160	Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light (By similarity).	Arabidopsis	Organ boundary1 defines a gene expressed at the junction between the shoot apical meristem and lateral organs.; PMID=21245300; DOI=10.1073/pnas.1018542108	https://pubmed.ncbi.nlm.nih.gov/21245300/						
TkA04G019820	TkA04G019820	reference_gene_literature	At5g28490	Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to continuous red (cR), far-red (cFR) and blue (cB) light in a phytochrome-dependent manner, at least during seedling development.	Arabidopsis	Overexpression of LSH1, a member of an uncharacterised gene family, causes enhanced light regulation of seedling development.; PMID=14871309; DOI=10.1111/j.1365-313x.2003.01993.x	https://pubmed.ncbi.nlm.nih.gov/14871309/						
TkA04G019820	TkA04G019820	reference_gene_function	At3g04510	Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light.	Arabidopsis	No verified direct reference in this release							
TkA04G019820	TkA04G019820	reference_gene_literature	At3g23290	Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light (By similarity).	Arabidopsis	CUP-SHAPED COTYLEDON1 transcription factor activates the expression of LSH4 and LSH3, two members of the ALOG gene family, in shoot organ boundary cells.; PMID=21435050; DOI=10.1111/j.1365-313x.2011.04571.x	https://pubmed.ncbi.nlm.nih.gov/21435050/						
TkA04G019820	TkA04G019820	reference_gene_function	A2XAV5	Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light.	Rice	No verified direct reference in this release