query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA03G472030	TkA03G472030	function	TkA03G472030	Similar to CMT3: DNA (cytosine-5)-methyltransferase CMT3 (Oryza sativa subsp. japonica OX%3D39947)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0006346	DNA methylation-dependent constitutive heterochromatin formation	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.591; coverage=101.499; evalue=0.0; UniProt GO evidence=IDA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0006351	DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.591; coverage=101.499; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0010069	zygote asymmetric cytokinesis in embryo sac	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.591; coverage=101.499; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0032259	methylation	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.966; coverage=93.772; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0044027	negative regulation of gene expression via chromosomal CpG island methylation	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.966; coverage=93.772; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0045814	negative regulation of gene expression, epigenetic	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.591; coverage=101.499; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0141010	transposable element silencing by siRNA-mediated DNA methylation	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.966; coverage=93.772; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0005634	nucleus	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.966; coverage=93.772; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0003677	DNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.966; coverage=93.772; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0003682	chromatin binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.966; coverage=93.772; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.966; coverage=93.772; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0031625	ubiquitin protein ligase binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.591; coverage=101.499; evalue=0.0; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0051719	DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.591; coverage=101.499; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	GO	GO:0051720	DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.966; coverage=93.772; evalue=0.0; UniProt GO evidence=IDA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	KEGG	ath:AT1G69770	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.591; coverage=101.499; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	KEGG	dosa:Os10g0104900	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.966; coverage=93.772; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	KEGG	zma:542060	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=55.287; coverage=90.542; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_009794	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA03G472030	TkA03G472030	organism_homology	Q94F88	sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3	Arabidopsis thaliana	identity=53.4; coverage=86.369; evalue=6.76e-292; rank=3	TK1151 Swiss-Prot homology; source_gene=TkA03G472030; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA03G472030			False
TkA03G472030	TkA03G472030	organism_homology	C0SQ89	sp|C0SQ89|CMT3_ORYSJ DNA (cytosine-5)-methyltransferase CMT3	Oryza sativa subsp. japonica	identity=55.8; coverage=85.932; evalue=2.41e-299; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA03G472030; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA03G472030			False
TkA03G472030	TkA03G472030	reference_gene_literature	At1g69770	Involved in the CpXpG methylation (e.g. CHG cytosine) and in gene silencing.	Arabidopsis	Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation.; PMID=11349138; DOI=10.1126/science.1059745	https://pubmed.ncbi.nlm.nih.gov/11349138/						
TkA03G472030	TkA03G472030	reference_gene_literature	At1g69770	Involved in the CpXpG methylation (e.g. CHG cytosine) and in gene silencing.	Arabidopsis	Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene.; PMID=11459824; DOI=10.1101/gad.905701	https://pubmed.ncbi.nlm.nih.gov/11459824/						
TkA03G472030	TkA03G472030	reference_gene_literature	At1g69770	Involved in the CpXpG methylation (e.g. CHG cytosine) and in gene silencing.	Arabidopsis	Genome-wide profiling of DNA methylation reveals transposon targets of CHROMOMETHYLASE3.; PMID=11790305; DOI=10.1016/s0960-9822(01)00622-4	https://pubmed.ncbi.nlm.nih.gov/11790305/						
TkA03G472030	TkA03G472030	reference_gene_literature	At1g69770	Involved in the CpXpG methylation (e.g. CHG cytosine) and in gene silencing.	Arabidopsis	JMJ24 targets CHROMOMETHYLASE3 for proteasomal degradation in Arabidopsis.; PMID=26798133; DOI=10.1101/gad.274647.115	https://pubmed.ncbi.nlm.nih.gov/26798133/						
TkA03G472030	TkA03G472030	reference_gene_function	Os10g0104900	Involved in CpXpG DNA methylation.	Rice	No verified direct reference in this release