query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation TkA03G392940 TkA03G392940 function TkA03G392940 Similar to NSP1: Protein NODULATION SIGNALING PATHWAY 1 (Lotus japonicus OX%3D34305) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.7; coverage=98.352; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 GO GO:0006355 regulation of DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.786; coverage=102.564; evalue=1.68e-180; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 GO GO:0009610 response to symbiotic fungus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.786; coverage=102.564; evalue=1.68e-180; UniProt GO evidence=IEA:UniProtKB-ARBA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 GO GO:0009877 nodulation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.7; coverage=98.352; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 GO GO:0042446 hormone biosynthetic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.752; coverage=74.542; evalue=2.22e-88; UniProt GO evidence=IMP:CACAO UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 GO GO:2000032 regulation of secondary shoot formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.752; coverage=74.542; evalue=2.22e-88; UniProt GO evidence=IMP:CACAO UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.7; coverage=98.352; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 GO GO:0003700 DNA-binding transcription factor activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.786; coverage=102.564; evalue=1.68e-180; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 GO GO:0043565 sequence-specific DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.786; coverage=102.564; evalue=1.68e-180; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 KEGG ath:AT3G13840 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.059; coverage=96.52; evalue=1.48e-151 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 KEGG ath:AT3G49950 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.671; coverage=73.443; evalue=3.63e-49 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 KEGG mtr:11434050 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.786; coverage=102.564; evalue=1.68e-180 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_002190 GCA_047496595.1_OSU_TarKok_2.0 many_to_one True TkA03G392940 TkA03G392940 organism_homology Q9LRW3 sp|Q9LRW3|SCL29_ARATH Scarecrow-like protein 29 Arabidopsis thaliana identity=54.8; coverage=74.067; evalue=5.22e-141; rank=3 TK1151 Swiss-Prot homology; source_gene=TkA03G392940; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA03G392940 False TkA03G392940 TkA03G392940 organism_homology Q84MQ9 sp|Q84MQ9|NSP1_ORYSJ Protein NODULATION SIGNALING PATHWAY 1 Oryza sativa subsp. japonica identity=43.0; coverage=71.828; evalue=2.42e-96; rank=4 TK1151 Swiss-Prot homology; source_gene=TkA03G392940; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA03G392940 False TkA03G392940 TkA03G392940 reference_gene_function At3g13840 Probable transcription factor involved in plant development. Arabidopsis No verified direct reference in this release TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis Gibberellin regulates Arabidopsis seed germination via RGL2, a GAI/RGA-like gene whose expression is up-regulated following imbibition.; PMID=11877383; DOI=10.1101/gad.969002 https://pubmed.ncbi.nlm.nih.gov/11877383/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis Gibberellin regulates Arabidopsis floral development via suppression of DELLA protein function.; PMID=14973286; DOI=10.1242/dev.00992 https://pubmed.ncbi.nlm.nih.gov/14973286/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis Floral homeotic genes are targets of gibberellin signaling in flower development.; PMID=15128937; DOI=10.1073/pnas.0402377101 https://pubmed.ncbi.nlm.nih.gov/15128937/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis Loss of function of four DELLA genes leads to light- and gibberellin-independent seed germination in Arabidopsis.; PMID=16034591; DOI=10.1007/s00425-005-0057-3 https://pubmed.ncbi.nlm.nih.gov/16034591/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis Phytohormone signalling pathways interact with sugars during seed germination and seedling development.; PMID=16916886; DOI=10.1093/jxb/erl096 https://pubmed.ncbi.nlm.nih.gov/16916886/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis Seed germination of GA-insensitive sleepy1 mutants does not require RGL2 protein disappearance in Arabidopsis.; PMID=17384169; DOI=10.1105/tpc.106.048009 https://pubmed.ncbi.nlm.nih.gov/17384169/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis Genetic and molecular regulation by DELLA proteins of trichome development in Arabidopsis.; PMID=17704233; DOI=10.1104/pp.107.104794 https://pubmed.ncbi.nlm.nih.gov/17704233/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis High temperature-induced abscisic acid biosynthesis and its role in the inhibition of gibberellin action in Arabidopsis seeds.; PMID=18162586; DOI=10.1104/pp.107.113738 https://pubmed.ncbi.nlm.nih.gov/18162586/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis The gibberellic acid signaling repressor RGL2 inhibits Arabidopsis seed germination by stimulating abscisic acid synthesis and ABI5 activity.; PMID=18941053; DOI=10.1105/tpc.108.061515 https://pubmed.ncbi.nlm.nih.gov/18941053/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis Transcriptional diversification and functional conservation between DELLA proteins in Arabidopsis.; PMID=20093430; DOI=10.1093/molbev/msq012 https://pubmed.ncbi.nlm.nih.gov/20093430/ TkA03G392940 TkA03G392940 reference_gene_literature At3g03450 Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Arabidopsis A seed coat bedding assay shows that RGL2-dependent release of abscisic acid by the endosperm controls embryo growth in Arabidopsis dormant seeds.; PMID=20956298; DOI=10.1073/pnas.1012896107 https://pubmed.ncbi.nlm.nih.gov/20956298/ TkA03G392940 TkA03G392940 reference_gene_literature Os03g0408600 Transcription factor involved in the control of strigolactone biosynthesis in roots through the activation of the beta-carotene isomerase D27, which participates in a pathway leading to biosynthesis of strigolactones. Rice Strigolactone biosynthesis in Medicago truncatula and rice requires the symbiotic GRAS-type transcription factors NSP1 and NSP2.; PMID=22039214; DOI=10.1105/tpc.111.089771 https://pubmed.ncbi.nlm.nih.gov/22039214/