query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation TkA02G587640 TkA02G587640 function TkA02G587640 Similar to AGO4A: Protein argonaute 4A (Oryza sativa subsp. japonica OX%3D39947) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0006417 regulation of translation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0009554 megasporogenesis biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.105; coverage=17.25; evalue=4.94e-16; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0010526 transposable element silencing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.105; coverage=17.25; evalue=4.94e-16; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0030422 siRNA processing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:FlyBase UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0031047 regulatory ncRNA-mediated gene silencing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.697; coverage=17.121; evalue=1.08e-19; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0031048 regulatory ncRNA-mediated heterochromatin formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=TAS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0031507 heterochromatin formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0042742 defense response to bacterium biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0048481 plant ovule development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.105; coverage=17.25; evalue=4.94e-16; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0051607 defense response to virus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0080188 gene silencing by siRNA-directed DNA methylation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:FlyBase UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:1904159 megasporocyte differentiation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.105; coverage=17.25; evalue=4.94e-16; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0000791 euchromatin cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.697; coverage=17.121; evalue=1.08e-19; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0005654 nucleoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0005730 nucleolus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.697; coverage=17.121; evalue=1.08e-19; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0015030 Cajal body cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0036464 cytoplasmic ribonucleoprotein granule cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:FlyBase UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:1990904 ribonucleoprotein complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0003682 chromatin binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0003723 RNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.697; coverage=17.121; evalue=1.08e-19; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0004521 RNA endonuclease activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.697; coverage=17.121; evalue=1.08e-19; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0035197 siRNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:FlyBase UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 GO GO:0035198 miRNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16; UniProt GO evidence=IDA:CAFA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 KEGG ath:AT2G27040 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.182; coverage=17.121; evalue=1.59e-16 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 KEGG ath:AT5G21150 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.105; coverage=17.25; evalue=4.94e-16 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 KEGG dosa:Os01g0275200 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.552; coverage=18.807; evalue=1.18e-12 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 KEGG dosa:Os01g0275600 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.697; coverage=17.121; evalue=1.08e-19 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 KEGG dosa:Os04g0151800 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.609; coverage=17.25; evalue=1.22e-17 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 KEGG osa:4324438 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.697; coverage=17.121; evalue=1.08e-19 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012097 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA02G587640 TkA02G587640 organism_homology Q9ZVD5 sp|Q9ZVD5|AGO4_ARATH Protein argonaute 4 Arabidopsis thaliana identity=43.2; coverage=52.727; evalue=7.89e-19; rank=3 TK1151 Swiss-Prot homology; source_gene=TkA02G587640; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA02G587640 False TkA02G587640 TkA02G587640 organism_homology Q9SDG8 sp|Q9SDG8|AGO4A_ORYSJ Protein argonaute 4A Oryza sativa subsp. japonica identity=44.7; coverage=52.727; evalue=2.56e-22; rank=1 TK1151 Swiss-Prot homology; source_gene=TkA02G587640; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA02G587640 False TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation.; PMID=12522258; DOI=10.1126/science.1079695 https://pubmed.ncbi.nlm.nih.gov/12522258/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats.; PMID=15242620; DOI=10.1016/j.cub.2004.06.055 https://pubmed.ncbi.nlm.nih.gov/15242620/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center.; PMID=16839878; DOI=10.1016/j.cell.2006.05.031 https://pubmed.ncbi.nlm.nih.gov/16839878/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.; PMID=16839879; DOI=10.1016/j.cell.2006.05.032 https://pubmed.ncbi.nlm.nih.gov/16839879/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation.; PMID=16998468; DOI=10.1038/nature05198 https://pubmed.ncbi.nlm.nih.gov/16998468/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components.; PMID=17938239; DOI=10.1101/gad.451207 https://pubmed.ncbi.nlm.nih.gov/17938239/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis ARGONAUTE4 is required for resistance to Pseudomonas syringae in Arabidopsis.; PMID=17993621; DOI=10.1105/tpc.107.054494 https://pubmed.ncbi.nlm.nih.gov/17993621/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide.; PMID=18342361; DOI=10.1016/j.cell.2008.02.034 https://pubmed.ncbi.nlm.nih.gov/18342361/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis Viral genome methylation as an epigenetic defense against geminiviruses.; PMID=18596098; DOI=10.1128/jvi.00719-08 https://pubmed.ncbi.nlm.nih.gov/18596098/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis RNA polymerase V transcription guides ARGONAUTE4 to chromatin.; PMID=19377477; DOI=10.1038/ng.365 https://pubmed.ncbi.nlm.nih.gov/19377477/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci.; PMID=20173091; DOI=10.1105/tpc.109.072199 https://pubmed.ncbi.nlm.nih.gov/20173091/ TkA02G587640 TkA02G587640 reference_gene_literature At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。 Arabidopsis Independent chromatin binding of ARGONAUTE4 and SPT5L/KTF1 mediates transcriptional gene silencing.; PMID=21738482; DOI=10.1371/journal.pgen.1002120 https://pubmed.ncbi.nlm.nih.gov/21738482/ TkA02G587640 TkA02G587640 reference_gene_function Os01g0275600 可能参与RNA沉默途径。 Rice 暂无已核实直接文献 TkA02G587640 TkA02G587640 reference_gene_function Os04g0151800 可能参与RNA沉默途径。 Rice 暂无已核实直接文献 TkA02G587640 TkA02G587640 reference_gene_function Q5NBN9 可能参与RNA沉默途径。 Rice 暂无已核实直接文献 TkA02G587640 TkA02G587640 reference_gene_function Os03g0682200 可能参与RNA沉默途径。 Rice 暂无已核实直接文献