query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA01G398330	TkA01G398330	function	TkA01G398330	Similar to ARF19: Auxin response factor 19 (Oryza sativa subsp. japonica OX%3D39947)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_003062	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA01G398330	TkA01G398330	GO	GO:0006351	DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.619; coverage=46.817; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_003062	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA01G398330	TkA01G398330	GO	GO:0006355	regulation of DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.619; coverage=46.817; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_003062	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA01G398330	TkA01G398330	GO	GO:0009734	auxin-activated signaling pathway	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.619; coverage=46.817; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_003062	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA01G398330	TkA01G398330	GO	GO:0005634	nucleus	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.619; coverage=46.817; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_003062	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA01G398330	TkA01G398330	GO	GO:0000976	transcription cis-regulatory region binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.619; coverage=46.817; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_003062	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA01G398330	TkA01G398330	KEGG	dosa:Os02g0141100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.974; coverage=57.297; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_003062	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA01G398330	TkA01G398330	KEGG	dosa:Os06g0702600	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.619; coverage=46.817; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_003062	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA01G398330	TkA01G398330	KEGG	dosa:Os08g0520500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.394; coverage=52.008; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_003062	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA01G398330	TkA01G398330	organism_homology	P93022	sp|P93022|ARFG_ARATH Auxin response factor 7	Arabidopsis thaliana	identity=45.4; coverage=42.788; evalue=5.89e-61; rank=4	TK1151 Swiss-Prot homology; source_gene=TkA01G398330; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA01G398330			False
TkA01G398330	TkA01G398330	organism_homology	Q0D9R7	sp|Q0D9R7|ARFS_ORYSJ Auxin response factor 19	Oryza sativa subsp. japonica	identity=45.4; coverage=48.918; evalue=1.08e-82; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA01G398330; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA01G398330			False
TkA01G398330	TkA01G398330	reference_gene_literature	At5g20730	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Arabidopsis	Overlapping and non-redundant functions of the Arabidopsis auxin response factors MONOPTEROS and NONPHOTOTROPIC HYPOCOTYL 4.; PMID=14973283; DOI=10.1242/dev.00925	https://pubmed.ncbi.nlm.nih.gov/14973283/						
TkA01G398330	TkA01G398330	reference_gene_literature	At5g20730	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Arabidopsis	A gradient of auxin and auxin-dependent transcription precedes tropic growth responses.; PMID=16371470; DOI=10.1073/pnas.0507127103	https://pubmed.ncbi.nlm.nih.gov/16371470/						
TkA01G398330	TkA01G398330	reference_gene_literature	At5g20730	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Arabidopsis	A role for auxin response factor 19 in auxin and ethylene signaling in Arabidopsis.; PMID=16461383; DOI=10.1104/pp.105.070987	https://pubmed.ncbi.nlm.nih.gov/16461383/						
TkA01G398330	TkA01G398330	reference_gene_literature	At5g20730	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Arabidopsis	ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis.; PMID=17259263; DOI=10.1105/tpc.106.047761	https://pubmed.ncbi.nlm.nih.gov/17259263/						
TkA01G398330	TkA01G398330	reference_gene_literature	At5g20730	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Arabidopsis	 Arabidopsis  ATXR2 deposits H3K36me3 at the promoters of  LBD  genes to facilitate cellular dedifferentiation.; PMID=29184030; DOI=10.1126/scisignal.aan0316	https://pubmed.ncbi.nlm.nih.gov/29184030/						
TkA01G398330	TkA01G398330	reference_gene_literature	At1g19220	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Arabidopsis	A role for auxin response factor 19 in auxin and ethylene signaling in Arabidopsis.; PMID=16461383; DOI=10.1104/pp.105.070987	https://pubmed.ncbi.nlm.nih.gov/16461383/						
TkA01G398330	TkA01G398330	reference_gene_literature	At1g19220	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Arabidopsis	ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis.; PMID=17259263; DOI=10.1105/tpc.106.047761	https://pubmed.ncbi.nlm.nih.gov/17259263/						
TkA01G398330	TkA01G398330	reference_gene_literature	At1g19220	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Arabidopsis	 Arabidopsis  ATXR2 deposits H3K36me3 at the promoters of  LBD  genes to facilitate cellular dedifferentiation.; PMID=29184030; DOI=10.1126/scisignal.aan0316	https://pubmed.ncbi.nlm.nih.gov/29184030/						
TkA01G398330	TkA01G398330	reference_gene_function	Os06g0702600	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Rice	No verified direct reference in this release							
TkA01G398330	TkA01G398330	reference_gene_function	Os08g0520500	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Rice	No verified direct reference in this release							
TkA01G398330	TkA01G398330	reference_gene_function	Os02g0141100	Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Rice	No verified direct reference in this release							
