query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_039343 LXL04_039343 function LXL04_039343 Similar to VIL2: VIN3-like protein 2 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0001666 response to hypoxia biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.594; coverage=107.744; evalue=1.14e-123; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0009409 response to cold biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IEP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0009908 flower development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0010048 vernalization response biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0010228 vegetative to reproductive phase transition of meristem biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IPI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0032922 circadian regulation of gene expression biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IEP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0040029 epigenetic regulation of gene expression biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.504; coverage=101.515; evalue=1.06e-77; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0045814 negative regulation of gene expression, epigenetic biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.594; coverage=107.744; evalue=1.14e-123; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0048572 short-day photoperiodism biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.528; coverage=51.684; evalue=3.36e-43; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0048575 short-day photoperiodism, flowering biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.528; coverage=51.684; evalue=3.36e-43; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0048587 regulation of short-day photoperiodism, flowering biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0070417 cellular response to cold biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.594; coverage=107.744; evalue=1.14e-123; UniProt GO evidence=IEP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0140719 constitutive heterochromatin formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0005677 chromatin silencing complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0009506 plasmodesma cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=HDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0016607 nuclear speck cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.594; coverage=107.744; evalue=1.14e-123; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0031519 PcG protein complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0003677 DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0008270 zinc ion binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0042802 identical protein binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 GO GO:0062072 histone H3K9me2/3 reader activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144; UniProt GO evidence=IDA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 KEGG ath:AT2G18880 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.504; coverage=101.515; evalue=1.06e-77 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 KEGG ath:AT3G24440 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.528; coverage=51.684; evalue=3.36e-43 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 KEGG ath:AT4G30200 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.728; coverage=123.737; evalue=1.48e-144 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 KEGG ath:AT5G57380 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.594; coverage=107.744; evalue=1.14e-123 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_039343 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_039343 LXL04_039343 organism_homology Q9SUM4 VIN3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=VIL2 PE=1 SV=1 Arabidopsis thaliana identity=39.728; coverage=100.0; evalue=1.48e-144; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_039343; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_039343 False LXL04_039343 LXL04_039343 organism_homology_status Oryza sativa 当前查询蛋白的来源表暂无该物种命中；不能据此判断不存在同源。 no_species_hit OH1004 OH1004 LXL04_039343 False LXL04_039343 LXL04_039343 reference_gene_literature At4g30200 可能通过调节基因表达参与春化和光周期途径。 Arabidopsis The Plant Homeo Domain finger protein, VIN3-LIKE 2, is necessary for photoperiod-mediated epigenetic regulation of the floral repressor, MAF5.; PMID=20837520; DOI=10.1073/pnas.1010834107 https://pubmed.ncbi.nlm.nih.gov/20837520/ LXL04_039343 LXL04_039343 reference_gene_literature At5g57380 在冷处理后通过介导同源异型基因 FLC的初始转录抑制，在春化过程中发挥核心作用。 Arabidopsis Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3.; PMID=14712276; DOI=10.1038/nature02195 https://pubmed.ncbi.nlm.nih.gov/14712276/ LXL04_039343 LXL04_039343 reference_gene_literature At5g57380 在冷处理后通过介导同源异型基因 FLC的初始转录抑制，在春化过程中发挥核心作用。 Arabidopsis A PHD finger protein involved in both the vernalization and photoperiod pathways in Arabidopsis.; PMID=17114575; DOI=10.1101/gad.1493306 https://pubmed.ncbi.nlm.nih.gov/17114575/ LXL04_039343 LXL04_039343 reference_gene_literature At5g57380 在冷处理后通过介导同源异型基因 FLC的初始转录抑制，在春化过程中发挥核心作用。 Arabidopsis The PHD finger protein VRN5 functions in the epigenetic silencing of Arabidopsis FLC.; PMID=17174094; DOI=10.1016/j.cub.2006.11.052 https://pubmed.ncbi.nlm.nih.gov/17174094/ LXL04_039343 LXL04_039343 reference_gene_function At2g18880 通过调控基因表达参与春化作用和光周期途径。 Arabidopsis 暂无已核实直接文献 LXL04_039343 LXL04_039343 reference_gene_literature At3g24440 通过调节相关花抑制因子 FLOWERING LOCUS C 和 FLOWERING LOCUS M 的表达，参与春化和光周期途径。 Arabidopsis A PHD finger protein involved in both the vernalization and photoperiod pathways in Arabidopsis.; PMID=17114575; DOI=10.1101/gad.1493306 https://pubmed.ncbi.nlm.nih.gov/17114575/ LXL04_039343 LXL04_039343 reference_gene_literature At3g24440 通过调节相关花抑制因子 FLOWERING LOCUS C 和 FLOWERING LOCUS M 的表达，参与春化和光周期途径。 Arabidopsis The PHD finger protein VRN5 functions in the epigenetic silencing of Arabidopsis FLC.; PMID=17174094; DOI=10.1016/j.cub.2006.11.052 https://pubmed.ncbi.nlm.nih.gov/17174094/ LXL04_039343 LXL04_039343 reference_gene_literature At3g24440 通过调节相关花抑制因子 FLOWERING LOCUS C 和 FLOWERING LOCUS M 的表达，参与春化和光周期途径。 Arabidopsis A PHD-polycomb repressive complex 2 triggers the epigenetic silencing of FLC during vernalization.; PMID=18854416; DOI=10.1073/pnas.0808687105 https://pubmed.ncbi.nlm.nih.gov/18854416/