query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_017843 LXL04_017843 function LXL04_017843 Similar to LUX: Transcription factor LUX (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0000122 negative regulation of transcription by RNA polymerase II biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=IDA:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0006355 regulation of DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=TAS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0007623 circadian rhythm biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0009409 response to cold biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.516; coverage=28.354; evalue=5.31e-30; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0009723 response to ethylene biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0009735 response to cytokinin biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0009736 cytokinin-activated signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=TAS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0009873 ethylene-activated signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0009909 regulation of flower development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.394; coverage=77.439; evalue=6.62e-58; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0010082 regulation of root meristem growth biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0010119 regulation of stomatal movement biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0010150 leaf senescence biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0010468 regulation of gene expression biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0042752 regulation of circadian rhythm biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=IDA:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0042753 positive regulation of circadian rhythm biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0048364 root development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0048511 rhythmic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.143; coverage=25.61; evalue=1.71e-40; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0071368 cellular response to cytokinin stimulus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0080113 regulation of seed growth biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0005829 cytosol cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=HDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0000156 phosphorelay response regulator activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20; UniProt GO evidence=ISS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0003677 DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 GO GO:0003700 DNA-binding transcription factor activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73; UniProt GO evidence=ISS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 KEGG ath:AT2G40970 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.516; coverage=28.354; evalue=5.31e-30 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 KEGG ath:AT3G46640 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.678; coverage=90.854; evalue=8.96e-73 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 KEGG ath:AT4G16110 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.944; coverage=21.951; evalue=7.03e-20 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 KEGG ath:AT5G59570 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.394; coverage=77.439; evalue=6.62e-58 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 KEGG dosa:Os01g0971800 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.143; coverage=25.61; evalue=1.71e-40 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017843 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_017843 LXL04_017843 organism_homology Q9SNB4 Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1 Arabidopsis thaliana identity=51.678; coverage=88.11; evalue=8.96e-73; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_017843; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_017843 False LXL04_017843 LXL04_017843 organism_homology Q94DH3 Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1 Oryza sativa subsp. japonica identity=82.143; coverage=25.61; evalue=1.71e-40; rank=3 OH-1004 Swiss-Prot homology; source_gene=LXL04_017843; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_017843 False LXL04_017843 LXL04_017843 reference_gene_literature At3g46640 Transcription factor that is essential for the generation of the circadian clock oscillation. Arabidopsis PHYTOCLOCK 1 encoding a novel GARP protein essential for the Arabidopsis circadian clock.; PMID=16164597; DOI=10.1111/j.1365-2443.2005.00892.x https://pubmed.ncbi.nlm.nih.gov/16164597/ LXL04_017843 LXL04_017843 reference_gene_literature At3g46640 Transcription factor that is essential for the generation of the circadian clock oscillation. Arabidopsis LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock.; PMID=21236673; DOI=10.1016/j.cub.2010.12.021 https://pubmed.ncbi.nlm.nih.gov/21236673/ LXL04_017843 LXL04_017843 reference_gene_function At5g59570 Transcription factor that is a critical component of the regulatory circuit of the circadian clock. Arabidopsis No verified direct reference in this release LXL04_017843 LXL04_017843 reference_gene_literature At2g40970 Probable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway. Arabidopsis A single-repeat R3-MYB transcription factor MYBC1 negatively regulates freezing tolerance in Arabidopsis.; PMID=20331973; DOI=10.1016/j.bbrc.2010.03.114 https://pubmed.ncbi.nlm.nih.gov/20331973/ LXL04_017843 LXL04_017843 reference_gene_literature At4g16110 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Arabidopsis The response regulator ARR2: a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis.; PMID=11370868; DOI=10.1007/s004380000400 https://pubmed.ncbi.nlm.nih.gov/11370868/ LXL04_017843 LXL04_017843 reference_gene_literature At4g16110 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Arabidopsis Two-component circuitry in Arabidopsis cytokinin signal transduction.; PMID=11574878; DOI=10.1038/35096500 https://pubmed.ncbi.nlm.nih.gov/11574878/ LXL04_017843 LXL04_017843 reference_gene_literature At4g16110 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Arabidopsis The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis.; PMID=15282545; DOI=10.1038/sj.emboj.7600337 https://pubmed.ncbi.nlm.nih.gov/15282545/ LXL04_017843 LXL04_017843 reference_gene_literature At4g16110 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Arabidopsis Cytokinin-mediated control of leaf longevity by AHK3 through phosphorylation of ARR2 in Arabidopsis.; PMID=16407152; DOI=10.1073/pnas.0505150103 https://pubmed.ncbi.nlm.nih.gov/16407152/ LXL04_017843 LXL04_017843 reference_gene_function Os01g0971800 Transcription factor that is essential for the generation of the circadian clock oscillation. Rice No verified direct reference in this release