query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_016972 LXL04_016972 function LXL04_016972 Similar to UPF3: Regulator of nonsense transcripts UPF3 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0009611 response to wounding biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0009863 salicylic acid mediated signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0009867 jasmonic acid mediated signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0042742 defense response to bacterium biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0045727 positive regulation of translation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0048571 long-day photoperiodism biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0051028 mRNA transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:2000623 negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.5; coverage=25.316; evalue=7.78e-18; UniProt GO evidence=IPI:MGI UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=HDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0005654 nucleoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.744; coverage=32.911; evalue=1.27e-20; UniProt GO evidence=IDA:HPA UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0005730 nucleolus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0005829 cytosol cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.744; coverage=32.911; evalue=1.27e-20; UniProt GO evidence=IDA:HPA UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0032991 protein-containing complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.095; coverage=35.443; evalue=8.71e-21; UniProt GO evidence=IPI:ZFIN UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0035145 exon-exon junction complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.744; coverage=32.911; evalue=1.27e-20; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0003723 RNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.095; coverage=35.443; evalue=8.71e-21; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0003729 mRNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107; UniProt GO evidence=HDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0042162 telomeric DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.095; coverage=35.443; evalue=8.71e-21; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 GO GO:0140311 protein sequestering activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.5; coverage=25.316; evalue=7.78e-18; UniProt GO evidence=IMP:MGI UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 KEGG ath:AT1G33980 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.553; coverage=108.439; evalue=1.18e-107 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 KEGG dre:393929 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.267; coverage=33.966; evalue=1.02e-17 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 KEGG dre:566608 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.095; coverage=35.443; evalue=8.71e-21 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 KEGG hsa:65109 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.744; coverage=32.911; evalue=1.27e-20 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 KEGG hsa:65110 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.5; coverage=25.316; evalue=7.78e-18 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_016972 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_016972 LXL04_016972 organism_homology Q9FVW4 Regulator of nonsense transcripts UPF3 OS=Arabidopsis thaliana OX=3702 GN=UPF3 PE=1 SV=1 Arabidopsis thaliana identity=44.553; coverage=100.0; evalue=1.18e-107; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_016972; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_016972 False LXL04_016972 LXL04_016972 organism_homology_status Oryza sativa 当前查询蛋白的来源表暂无该物种命中；不能据此判断不存在同源。 no_species_hit OH1004 OH1004 LXL04_016972 False LXL04_016972 LXL04_016972 reference_gene_literature At1g33980 在核膜胞质侧招募UPF2，随后形成UPF1-UPF2-UPF3监视复合体（包括结合于阻滞核糖体释放因子的UPF1），据信激活NMD。 Arabidopsis UPF3 suppresses aberrant spliced mRNA in Arabidopsis.; PMID=16098107; DOI=10.1111/j.1365-313x.2005.02473.x https://pubmed.ncbi.nlm.nih.gov/16098107/ LXL04_016972 LXL04_016972 reference_gene_literature At1g33980 在核膜胞质侧招募UPF2，随后形成UPF1-UPF2-UPF3监视复合体（包括结合于阻滞核糖体释放因子的UPF1），据信激活NMD。 Arabidopsis Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis.; PMID=19181858; DOI=10.1073/pnas.0808902106 https://pubmed.ncbi.nlm.nih.gov/19181858/ LXL04_016972 LXL04_016972 reference_gene_literature At1g33980 在核膜胞质侧招募UPF2，随后形成UPF1-UPF2-UPF3监视复合体（包括结合于阻滞核糖体释放因子的UPF1），据信激活NMD。 Arabidopsis Extensive coupling of alternative splicing of pre-mRNAs of serine/arginine (SR) genes with nonsense-mediated decay.; PMID=19863731; DOI=10.1111/j.1469-8137.2009.03065.x https://pubmed.ncbi.nlm.nih.gov/19863731/ LXL04_016972 LXL04_016972 reference_gene_literature At1g33980 在核膜胞质侧招募UPF2，随后形成UPF1-UPF2-UPF3监视复合体（包括结合于阻滞核糖体释放因子的UPF1），据信激活NMD。 Arabidopsis Nonsense-mediated mRNA decay factors, UPF1 and UPF3, contribute to plant defense.; PMID=22025558; DOI=10.1093/pcp/pcr144 https://pubmed.ncbi.nlm.nih.gov/22025558/ LXL04_016972 LXL04_016972 reference_gene_literature At1g33980 在核膜胞质侧招募UPF2，随后形成UPF1-UPF2-UPF3监视复合体（包括结合于阻滞核糖体释放因子的UPF1），据信激活NMD。 Arabidopsis Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis.; PMID=22127866; DOI=10.1093/nar/gkr932 https://pubmed.ncbi.nlm.nih.gov/22127866/ LXL04_016972 LXL04_016972 reference_gene_literature At1g33980 在核膜胞质侧招募UPF2，随后形成UPF1-UPF2-UPF3监视复合体（包括结合于阻滞核糖体释放因子的UPF1），据信激活NMD。 Arabidopsis Arabidopsis plants having defects in nonsense-mediated mRNA decay factors UPF1, UPF2, and UPF3 show photoperiod-dependent phenotypes in development and stress responses.; PMID=22353561; DOI=10.1111/j.1744-7909.2012.01093.x https://pubmed.ncbi.nlm.nih.gov/22353561/