query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_008230 LXL04_008230 function LXL04_008230 Similar to FDS-2: Farnesyl diphosphate synthase 2 (Artemisia spiciformis OX%3D235357) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0006417 regulation of translation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0030422 siRNA processing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:FlyBase UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0031047 regulatory ncRNA-mediated gene silencing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0031048 regulatory ncRNA-mediated heterochromatin formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=TAS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0031507 heterochromatin formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0042742 defense response to bacterium biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0051607 defense response to virus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0080188 gene silencing by siRNA-directed DNA methylation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:FlyBase UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0000791 euchromatin cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0005654 nucleoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0005730 nucleolus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0015030 Cajal body cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0036464 cytoplasmic ribonucleoprotein granule cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:FlyBase UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:1990904 ribonucleoprotein complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0003682 chromatin binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0003723 RNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0004521 RNA endonuclease activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:FlyBase UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0035197 siRNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:FlyBase UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 GO GO:0035198 miRNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22; UniProt GO evidence=IDA:CAFA UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 KEGG ath:AT2G27040 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.525; coverage=74.436; evalue=2e-22 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 KEGG ath:AT5G21030 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.82; coverage=66.917; evalue=9.38e-16 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 KEGG dosa:Os01g0275600 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.958; coverage=72.18; evalue=3e-19 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 KEGG dosa:Os04g0151800 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.526; coverage=71.429; evalue=1.15e-20 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 KEGG dosa:Os07g0265600 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.739; coverage=69.173; evalue=1e-14 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 KEGG osa:4324438 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.958; coverage=72.18; evalue=3e-19 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008230 GCA_047496595.1_OSU_TarKok_2.0 one_to_many False LXL04_008230 LXL04_008230 organism_homology Q9ZVD5 Protein argonaute 4 OS=Arabidopsis thaliana OX=3702 GN=AGO4 PE=1 SV=2 Arabidopsis thaliana identity=52.525; coverage=58.647; evalue=2e-22; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_008230; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_008230 False LXL04_008230 LXL04_008230 organism_homology Q0JF58 Protein argonaute 4B OS=Oryza sativa subsp. japonica OX=39947 GN=AGO4B PE=2 SV=1 Oryza sativa subsp. japonica identity=50.526; coverage=56.391; evalue=1.15e-20; rank=2 OH-1004 Swiss-Prot homology; source_gene=LXL04_008230; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_008230 False LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation.; PMID=12522258; DOI=10.1126/science.1079695 https://pubmed.ncbi.nlm.nih.gov/12522258/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats.; PMID=15242620; DOI=10.1016/j.cub.2004.06.055 https://pubmed.ncbi.nlm.nih.gov/15242620/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center.; PMID=16839878; DOI=10.1016/j.cell.2006.05.031 https://pubmed.ncbi.nlm.nih.gov/16839878/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.; PMID=16839879; DOI=10.1016/j.cell.2006.05.032 https://pubmed.ncbi.nlm.nih.gov/16839879/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation.; PMID=16998468; DOI=10.1038/nature05198 https://pubmed.ncbi.nlm.nih.gov/16998468/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components.; PMID=17938239; DOI=10.1101/gad.451207 https://pubmed.ncbi.nlm.nih.gov/17938239/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis ARGONAUTE4 is required for resistance to Pseudomonas syringae in Arabidopsis.; PMID=17993621; DOI=10.1105/tpc.107.054494 https://pubmed.ncbi.nlm.nih.gov/17993621/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide.; PMID=18342361; DOI=10.1016/j.cell.2008.02.034 https://pubmed.ncbi.nlm.nih.gov/18342361/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis Viral genome methylation as an epigenetic defense against geminiviruses.; PMID=18596098; DOI=10.1128/jvi.00719-08 https://pubmed.ncbi.nlm.nih.gov/18596098/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis RNA polymerase V transcription guides ARGONAUTE4 to chromatin.; PMID=19377477; DOI=10.1038/ng.365 https://pubmed.ncbi.nlm.nih.gov/19377477/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci.; PMID=20173091; DOI=10.1105/tpc.109.072199 https://pubmed.ncbi.nlm.nih.gov/20173091/ LXL04_008230 LXL04_008230 reference_gene_literature At2g27040 Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci. Arabidopsis Independent chromatin binding of ARGONAUTE4 and SPT5L/KTF1 mediates transcriptional gene silencing.; PMID=21738482; DOI=10.1371/journal.pgen.1002120 https://pubmed.ncbi.nlm.nih.gov/21738482/ LXL04_008230 LXL04_008230 reference_gene_function At5g21030 Involved in RNA-mediated post-transcriptional gene silencing (PTGS). Arabidopsis No verified direct reference in this release LXL04_008230 LXL04_008230 reference_gene_function Os04g0151800 Probably involved in the RNA silencing pathway. Rice No verified direct reference in this release LXL04_008230 LXL04_008230 reference_gene_function Os01g0275600 Probably involved in the RNA silencing pathway. Rice No verified direct reference in this release LXL04_008230 LXL04_008230 reference_gene_function Os07g0265600 Probably involved in the RNA silencing pathway. Rice No verified direct reference in this release