query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_006624 LXL04_006624 function LXL04_006624 Similar to CRWN4: Protein CROWDED NUCLEI 4 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0006974 DNA damage response biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0006997 nucleus organization biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0043578 nuclear matrix organization biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.306; coverage=83.527; evalue=7.15e-77; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0097298 regulation of nucleus size biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:1902584 positive regulation of response to water deprivation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.205; coverage=90.603; evalue=5.1e-160; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:2000280 regulation of root development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.205; coverage=90.603; evalue=5.1e-160; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0000785 chromatin cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.044; coverage=94.664; evalue=1.4e-68; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0005576 extracellular region cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.044; coverage=94.664; evalue=1.4e-68; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0005635 nuclear envelope cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.044; coverage=94.664; evalue=1.4e-68; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0005652 nuclear lamina cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0005654 nucleoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0005739 mitochondrion cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.044; coverage=94.664; evalue=1.4e-68; UniProt GO evidence=HDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0010369 chromocenter cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0016363 nuclear matrix cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.205; coverage=90.603; evalue=5.1e-160; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0031965 nuclear membrane cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0034399 nuclear periphery cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 GO GO:0035861 site of double-strand break cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.044; coverage=94.664; evalue=1.4e-68; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 KEGG ath:AT1G67230 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.044; coverage=94.664; evalue=1.4e-68 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 KEGG ath:AT5G65770 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.639; coverage=96.52; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 KEGG dosa:Os01g0767000 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.205; coverage=90.603; evalue=5.1e-160 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_006624 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_006624 LXL04_006624 organism_homology Q9FLH0 Protein CROWDED NUCLEI 4 OS=Arabidopsis thaliana OX=3702 GN=CRWN4 PE=1 SV=2 Arabidopsis thaliana identity=49.639; coverage=92.807; evalue=0.0; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_006624; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_006624 False LXL04_006624 LXL04_006624 organism_homology Q0JJ05 Nuclear matrix constituent protein 1b OS=Oryza sativa subsp. japonica OX=39947 GN=NMCP1B PE=1 SV=1 Oryza sativa subsp. japonica identity=40.205; coverage=89.791; evalue=5.1e-160; rank=2 OH-1004 Swiss-Prot homology; source_gene=LXL04_006624; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_006624 False LXL04_006624 LXL04_006624 reference_gene_literature At5g65770 Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments (By similarity). Arabidopsis LITTLE NUCLEI 1 and 4 regulate nuclear morphology in Arabidopsis thaliana.; PMID=23396599; DOI=10.1093/pcp/pct031 https://pubmed.ncbi.nlm.nih.gov/23396599/ LXL04_006624 LXL04_006624 reference_gene_literature At5g65770 Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments (By similarity). Arabidopsis Arabidopsis CROWDED NUCLEI (CRWN) proteins are required for nuclear size control and heterochromatin organization.; PMID=24308514; DOI=10.1186/1471-2229-13-200 https://pubmed.ncbi.nlm.nih.gov/24308514/ LXL04_006624 LXL04_006624 reference_gene_literature At1g67230 Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments (By similarity). Arabidopsis LITTLE NUCLEI genes affecting nuclear morphology in Arabidopsis thaliana.; PMID=17873096; DOI=10.1105/tpc.107.053231 https://pubmed.ncbi.nlm.nih.gov/17873096/ LXL04_006624 LXL04_006624 reference_gene_literature At1g67230 Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments (By similarity). Arabidopsis LITTLE NUCLEI 1 and 4 regulate nuclear morphology in Arabidopsis thaliana.; PMID=23396599; DOI=10.1093/pcp/pct031 https://pubmed.ncbi.nlm.nih.gov/23396599/ LXL04_006624 LXL04_006624 reference_gene_literature At1g67230 Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments (By similarity). Arabidopsis Arabidopsis CROWDED NUCLEI (CRWN) proteins are required for nuclear size control and heterochromatin organization.; PMID=24308514; DOI=10.1186/1471-2229-13-200 https://pubmed.ncbi.nlm.nih.gov/24308514/ LXL04_006624 LXL04_006624 reference_gene_literature At1g67230 Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments (By similarity). Arabidopsis The Novel Nuclear Envelope Protein KAKU4 Modulates Nuclear Morphology in Arabidopsis.; PMID=24824484; DOI=10.1105/tpc.113.122168 https://pubmed.ncbi.nlm.nih.gov/24824484/ LXL04_006624 LXL04_006624 reference_gene_literature Os01g0767000 Architectural component of nuclear structure that plays different roles in controlling nuclear size and morphology (Probable). Rice A lamin-like protein OsNMCP1 regulates drought resistance and root growth through chromatin accessibility modulation by interacting with a chromatin remodeller OsSWI3C in rice.; PMID=32129897; DOI=10.1111/nph.16518 https://pubmed.ncbi.nlm.nih.gov/32129897/